Hi Iassoan, I’m trying to use the TotalSegmentator Tool but i receive this error below the Apply button:
RuntimeError: FIND was unable to find an engine to execute this computation
Exception ignored in: <totalsegmentator.libs.DummyFile object at 0x000002765B9EE4F0>
AttributeError: ‘DummyFile’ object has no attribute ‘flush’
I checked if could be an error due to the GPU’s memory but on my laptop is 10Gb of Memory.
Thanks for you time
AZ
rbumm
(Rudolf Bumm)
March 15, 2023, 2:01pm
2
Could you provide some more details? What is the brand and model of the GPU?
Sure. The model is “GPU intel(r) uhd graphics 620”
rbumm
(Rudolf Bumm)
March 15, 2023, 2:55pm
4
Unfortunately, GPU processing will require an NVIDIA GPU, so you could switch to CPU processing which will take longer to run (30 minutes vs. 2 minutes).
Switch here:
I don’t know why but it doesn’t switch the computation on CPU, it still remain on GPU and ask me if i want to enable the ‘fast’ mode.
lassoan
(Andras Lasso)
March 15, 2023, 3:17pm
6
You need to uninstall the GPU version of pytorch, restart Slicer, and install the CPU version of pytorch - as described
here .
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Ok, now it is correctly working. Thank you so much for your time
1 Like
J_UWA
(Juliet)
May 9, 2023, 4:59am
8
Hey @lassoan , I have uninstalled the GPU version of pytorch, restart Slicer, and install the CPU version of pytorch. However, still encountering the same error.
lassoan
(Andras Lasso)
May 9, 2023, 10:45am
9
What is the installed pytorch version?
J_UWA
(Juliet)
May 9, 2023, 4:02pm
10
I found your other post here.
For the time being, since i have slicer installed in a computer which, by default, has no internet acess, i cannot download the sample data set and test TotalSegmentator with it. As soon as i have acess to internet, i will try.
The messages that appear after the Apply button are as follows:
Processing started
Writing input file to C:/Users/Augusto/AppData/Local/Temp/Slicer/__SlicerTemp__2022-12-15_21+10+39.789/total-segmentator-input.nii
Creating segmentations with TotalSegmentator AI…
Tota…
It’s been resolved. Thank you !
1 Like