I have some problems installing TotalSegmentator. Let me try to describe it clearly. I hope to get your help.
My device：DELL windows 10 NVIDIA GeForceRTX3060 ,Display Memory: 28386 MB
pyTorch :version 1.13+cu117
NVidia driver: version 512.77
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Processing started
Writing input file to C:/Users/Administrator/AppData/Local/Temp/Slicer/__SlicerTemp__2023-02-08_16+16+43.146/total-segmentator-input.nii
Creating segmentations with TotalSegmentator AI…
Total Segmentator arguments: [‘-i’, ‘C:/Users/Administrator/AppData/Local/Temp/Slicer/__SlicerTemp__2023-02-08_16+16+43.146/total-segmentator-input.nii’, ‘-o’, ‘C:/Users/Administrator/AppData/Local/Temp/Slicer/__SlicerTemp__2023-02-08_16+16+43.146/segmentation’, ‘–ml’, ‘–task’, ‘total’]
If you use this tool please cite: [2208.05868] TotalSegmentator: robust segmentation of 104 anatomical structures in CT images
Downloading pretrained weights for Task 251 (~230MB) …
Traceback (most recent call last):
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\urllib3\connection.py”, line 174, in _new_conn
conn = connection.create_connection(
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\urllib3\util\connection.py”, line 72, in create_connection
for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\socket.py”, line 954, in getaddrinfo
for res in _socket.getaddrinfo(host, port, family, type, proto, flags):
socket.gaierror: [Errno 11004] getaddrinfo failed
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\urllib3\connectionpool.py”, line 703, in urlopen
httplib_response = self._make_request(
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\urllib3\connectionpool.py”, line 386, in _make_request
self._validate_conn(conn)
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\urllib3\connectionpool.py”, line 1042, in _validate_conn
conn.connect()
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\urllib3\connection.py”, line 358, in connect
self.sock = conn = self._new_conn()
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\urllib3\connection.py”, line 186, in _new_conn
raise NewConnectionError(
urllib3.exceptions.NewConnectionError: <urllib3.connection.HTTPSConnection object at 0x0000023943A0D700>: Failed to establish a new connection: [Errno 11004] getaddrinfo failed
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\requests\adapters.py”, line 489, in send
resp = conn.urlopen(
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\urllib3\connectionpool.py”, line 787, in urlopen
retries = retries.increment(
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\urllib3\util\retry.py”, line 592, in increment
raise MaxRetryError(_pool, url, error or ResponseError(cause))
urllib3.exceptions.MaxRetryError: HTTPSConnectionPool(host=‘zenodo.org’, port=443): Max retries exceeded with url: /record/6802342/files/Task251_TotalSegmentator_part1_organs_1139subj.zip?download=1 (Caused by NewConnectionError(‘<urllib3.connection.HTTPSConnection object at 0x0000023943A0D700>: Failed to establish a new connection: [Errno 11004] getaddrinfo failed’))
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Scripts\TotalSegmentator”, line 241, in
main()
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Scripts\TotalSegmentator”, line 200, in main
download_pretrained_weights(tid)
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\totalsegmentator\libs.py”, line 175, in download_pretrained_weights
download_url_and_unpack(WEIGHTS_URL, config_dir)
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\totalsegmentator\libs.py”, line 69, in download_url_and_unpack
raise e
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\totalsegmentator\libs.py”, line 55, in download_url_and_unpack
with requests.get(url, stream=True) as r:
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\requests\api.py”, line 73, in get
return request(“get”, url, params=params, **kwargs)
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\requests\api.py”, line 59, in request
return session.request(method=method, url=url, **kwargs)
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\requests\sessions.py”, line 587, in request
resp = self.send(prep, **send_kwargs)
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\requests\sessions.py”, line 701, in send
r = adapter.send(request, **kwargs)
File “C:\ProgramData\NA-MIC\Slicer 5.2.1\lib\Python\Lib\site-packages\requests\adapters.py”, line 565, in send
raise ConnectionError(e, request=request)
requests.exceptions.ConnectionError: HTTPSConnectionPool(host=‘zenodo.org’, port=443): Max retries exceeded with url: /record/6802342/files/Task251_TotalSegmentator_part1_organs_1139subj.zip?download=1 (Caused by NewConnectionError(‘<urllib3.connection.HTTPSConnection object at 0x0000023943A0D700>: Failed to establish a new connection: [Errno 11004] getaddrinfo failed’))