Vmtk Vesselness Filtering without seed point?

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It is a Python scripted module, so instead of old-school and platform-dependent bash/batch scripting, you can write a short Python script or Jupyter notebook to iterate through your data sets.

You can run vessel filtering by calling computeVesselnessVolume method of the VesselnessFiltering module logic:

import VesselnessFiltering
vfl=VesselnessFiltering.VesselnessFilteringLogic()
vfl.computeVesselnessVolume(inputVolumeNode, outputVolumeNode, minimumDiameterMm=0.2, maximumDiameterMm=25, alpha=0.3, beta=0.3, contrastMeasure=150)
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