I have a vtkSegmentation data instance obtained as a segmentation results, using python code and slicer’s lungCT_analyzer modules code. I would like to get the same in niftii format (i.e .nii.gz), so that I can visually analyze the segmentation results on some sample lung CT dataset and process …

vtkSegmentation data to niftii conversion

rbumm (Rudolf Bumm) January 2, 2023, 10:01am 5

Topic		Replies	Views
Converting Segmentation to Volume automatically w/ Python or Matlab Development registration , segmentation , python , nifti	1	1957	April 3, 2021
Convert DICOM-RT CT image and segmented object into NIFTI format Support	4	1893	February 28, 2019
.vtp to segmentation & load segmentation in Python Support	1	728	May 22, 2018
Export segmentation to Nifti messes up labels Support segmentation	7	4308	April 27, 2017
Exporting Segmentations to DICOM Support	8	4601	February 28, 2019