What input does slicer take?


(Vlad Dobrin) #1

Operating system: Windows
Slicer version: 4.10.0
Expected behavior: N/A
Actual behavior: N/A

What file type input does 3D Slicer take in? and what can it produce?
As one example could 3D Slicer take JPEG or TIFF?


(Csaba Pinter) #2

Slicer can take a wide range of data types, including regular image formats you mention.

Here’s a tutorial about data loading and visualization:
https://www.slicer.org/wiki/Documentation/Nightly/Training#Slicer4_Data_Loading_and_3D_Visualization
And here’s another page that may help:
https://slicer.readthedocs.io/en/latest/user_guide/data_loading_and_saving.html

What would you like to do exactly?


(Vlad Dobrin) #3

Forum,

I would like to take a series of jpeg and/or tiff images that are stacked together, similar to the way MRI images are ordered, in order to segment. I just wanted to know if 3D Slicer allowed such images.

Thank you,

Vlad


(Andras Lasso) #4

See this FAQ about how to import jpeg/tiff stack as a volume:

https://www.slicer.org/wiki/Documentation/Nightly/FAQ#How_to_load_data_from_a_sequence_of_jpg.2C_tif.2C_or_png_files.3F


(Vlad Dobrin) #5

Thank you will try! I’ll let you know what happens.

Vlad