I’m trying to convert some of our own annotations (closed polygons) into dicom-rt format.
I created some dicom files with ROIs of random coordinates from scratch using pydicom. I can visualize the ROIs of created dicom files in Matlab.
info = dicominfo("example/slice-01.dcm"); % info = dicominfo("rtstruct.dcm"); contour = dicomContours(info); figure plotContour(contour)
However, I cannot visualize the ROIs with Slicer. I have installed the
SlicerRT extension and there is no error log when I load the dicom files.
Ubuntu: 22.04 + MacOS Ventura 13.0.1 Slicer: 5.2.1 r31317 / 77da381
Examplar generated dicom files can be downloaded from https://kaizhao.net/dicoms.zip.
Any help will be appreciated!