I have load a CT volume to the 3D slicer and centred it and saved it as a mhd file. The header file is shown below and it is in RPI orientation. Now I want to convert this into RAI orientation.
How can I do that using the Slicer ?
In order to change from RPI to RAI, is that Ok if I change the Transformation Matrix as 1 0 0 0 1 0 0 0 1 instead of 1 0 0 0 -1 0 0 0 1 and the offset as -196.615234375 -196.615234375 -250 ?
ObjectType = Image
NDims = 3
BinaryData = True
BinaryDataByteOrderMSB = False
CompressedData = False
TransformMatrix = 1 0 0 0 -1 0 0 0 1
Offset = -196.615234375 196.615234375 -250
CenterOfRotation = 0 0 0
AnatomicalOrientation = RPI
ElementSpacing = 0.76953125 0.76953125 1
DimSize = 512 512 501
ElementType = MET_FLOAT
ElementDataFile = volume-10.raw