Medical Image Segmentation (CT) of Frog Organs using 3D Slicer

Support
1

I am working on a research project focused on environmental radioprotection. The goal is to develop voxelized phantoms of terrestrial species to study the radiological effects of pollutants. I have a CT-scan series of a frog and I need an expert to perform the precise segmentation of its internal organs.

I am looking for someone proficient in 3D Slicer to handle the manual or semi-automatic segmentation of various organs from the CT DICOM files.

Once the segmentation is complete, I will use these 3D models to calculate internal dosimetric functions for radioactive waste studies. This task is essential to replace primitive geometric shapes with realistic anatomical models.

Thank you

2

If you have good-quality image then you can segment each organ by one (or maybe a few) clicks using NNInteractive extension.

3

I agree with Andras, nnInteractive should be good for this. I have tried it with a salamander microCT scan with good results.

4

Iamradiology technologist with strong experience in CT and MRI image analysis and precise segmentation using 3D Slicer.

I have hands-on experience in organ segmentation, anatomical labeling, and 3D modeling for both CT and MRI datasets, including research-oriented projects.

My background allows me to ensure voxel-accurate segmentations suitable for radiological, dosimetric, and AI-related studies.

I would be glad to review a sample dataset and discuss project details.