RTstruct to Label map


I have 200 dicom datapoints that contain a image and a RTstruct for the segmentations. I need to convert all RTstructs to Label volumes (maps) and can do this with the segmentations module. However, I have to perform every step manually and I am thus looking for a way to do it batch-wise. Since the segmentations module does not have a CLI, I was wondering if there is another solution that would allow me to access the module without the GUI.

Best regards,

This batch processing script does exactly what you want

See readme file for details.