I have used total segmentator to aquire liver volume. However, when I go to export the file as NIFTI I get this error message, “the current segmentation does not completely fit into the new geometry. Do you want to crop the segmentation”. I do not want to crop the area as I need the entire segmentation. Any help would be greatly appreciated.
Segmentation geometry should have a “pad” option. Make sure it is checked and then rertry.
Can you elaborate what is meant by ‘pad’ options here? I am facing the same issue but unable to find any such option.
Thanks for the quick response! I’ll try this out. One more small q., how did you get that dialog box?
It is the cube icon above the green arrow.