Hi everyone,
Whilst working with some NifTi files, all regular 3DNifti’s seem to match between my application and 3D-Slicer. However, I noticed that the 4D NifTi file I’m working with seems to be flipped in 3D-Slicer rather awkwardly (flipped + rotated). It’s worth mentioning that I was curious and I tried the same 4D NifTi in ITK-SNAP and it did line up with mine (albeit reversed coordinate system). Any idea why this is the case?
Regular Nifti comparison with 3D-Slicer
- next is 3D slicer
Here is another regular comparison.
and another
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Here is the 4D comparison I find awkward
- here is what
ITK-SNAPproduced, which is a lot similar to mine.
