I am currently working with fMRI, trying to compare performance between SPM and the software provided by GE, BrainWave PA. Besides comparing the two sets of post-processed images with two senior radiologists, I would like to do a quantitative analysis. I’ve considered a DICE Coefficient obtained for example with 3DSlicer.
However, I am having trouble with the formats. GE provides a stack of images for axial, coronal and sagittal views and a BIP (burn in pixel) volume. I haven’t been able to use neither of these to study a correlation with the data obtained with SPM.
I would like to ask if you are aware of any method available to achieve this task.